65 research outputs found
BRST - BFV analysis of anomalies in bosonic string theory interacting with background gravitational field
The general BRST-BFV analysis of anomaly in the string theory coupled to
background fields is carried out. An exact equation for c-valued symbol of
anomaly operator is found and structure of its solutions is studied.Comment: 11 pages, LATEX, no figure
Stability and asymptotic behavior of periodic traveling wave solutions of viscous conservation laws in several dimensions
Under natural spectral stability assumptions motivated by previous
investigations of the associated spectral stability problem, we determine sharp
estimates on the linearized solution operator about a multidimensional
planar periodic wave of a system of conservation laws with viscosity, yielding
linearized stability for all and dimensions and nonlinear stability and
-asymptotic behavior for and . The behavior can in
general be rather complicated, involving both convective (i.e., wave-like) and
diffusive effects
Quantum Gambling Using Two Nonorthogonal States
We give a (remote) quantum gambling scheme that makes use of the fact that
quantum nonorthogonal states cannot be distinguished with certainty. In the
proposed scheme, two participants Alice and Bob can be regarded as playing a
game of making guesses on identities of quantum states that are in one of two
given nonorthogonal states: if Bob makes a correct (an incorrect) guess on the
identity of a quantum state that Alice has sent, he wins (loses). It is shown
that the proposed scheme is secure against the nonentanglement attack. It can
also be shown heuristically that the scheme is secure in the case of the
entanglement attack.Comment: no essential correction, 4 pages, RevTe
Optically Driven Qubits in Artificial Molecules
We present novel models of quantum gates based on coupled quantum dots in
which a qubit is regarded as the superposition of ground states in each dot.
Coherent control on the qubit is performed by both a frequency and a
polarization of a monochromatic light pulse illuminated on the quantum dots. We
also show that a simple combination of two single qubit gates functions as a
controlled NOT gate resulting from an electron-electron interaction. To examine
the decoherence of quantum states, we discuss electronic relaxation contributed
mainly by LA phonon processes.Comment: 11 pages, 4 figures, submitted to Physical Review
Ultrarelativistic electron-hole pairing in graphene bilayer
We consider ground state of electron-hole graphene bilayer composed of two
independently doped graphene layers when a condensate of spatially separated
electron-hole pairs is formed. In the weak coupling regime the pairing affects
only conduction band of electron-doped layer and valence band of hole-doped
layer, thus the ground state is similar to ordinary BCS condensate. At strong
coupling, an ultrarelativistic character of electron dynamics reveals and the
bands which are remote from Fermi surfaces (valence band of electron-doped
layer and conduction band of hole-doped layer) are also affected by the
pairing. The analysis of instability of unpaired state shows that s-wave
pairing with band-diagonal condensate structure, described by two gaps, is
preferable. A relative phase of the gaps is fixed, however at weak coupling
this fixation diminishes allowing gapped and soliton-like excitations. The
coupled self-consistent gap equations for these two gaps are solved at zero
temperature in the constant-gap approximation and in the approximation of
separable potential. It is shown that, if characteristic width of the pairing
region is of the order of magnitude of chemical potential, then the value of
the gap in the spectrum is not much different from the BCS estimation. However,
if the pairing region is wider, then the gap value can be much larger and
depends exponentially on its energy width.Comment: 13 pages with 8 figures; accepted to Eur. Phys. J.
Extended Theories of Gravity and their Cosmological and Astrophysical Applications
We review Extended Theories of Gravity in metric and Palatini formalism
pointing out their cosmological and astrophysical application. The aim is to
propose an alternative approach to solve the puzzles connected to dark
components.Comment: 44 pages, 11 figure
Inheritance of deleterious mutations at both BRCA1 and BRCA2 in an international sample of 32,295 women
Background: Most BRCA1 or BRCA2 mutation carriers have inherited a single (heterozygous) mutation. Transheterozygotes (TH) who have inherited deleterious mutations in both BRCA1 and BRCA2 are rare, and the consequences of transheterozygosity are poorly understood. Methods: From 32,295 female BRCA1/2 mutation carriers, we identified 93 TH (0.3 %). "Cases" were defined as TH, and "controls" were single mutations at BRCA1 (SH1) or BRCA2 (SH2). Matched SH1 "controls" carried a BRCA1 mutation found in the TH "case". Matched SH2 "controls" carried a BRCA2 mutation found in the TH "case". After matching the TH carriers with SH1 or SH2, 91 TH were matched to 9316 SH1, and 89 TH were matched to 3370 SH2. Results: The majority of TH (45.2 %) involved the three common Jewish mutations. TH were more likely than SH1 and SH2 women to have been ever diagnosed with breast cancer (BC; p = 0.002). TH were more likely to be diagnosed with ovarian cancer (OC) than SH2 (p = 0.017), but not SH1. Age at BC diagnosis was the same in TH vs. SH1 (p = 0.231), but was on average 4.5 years younger in TH than in SH2 (p < 0.001). BC in TH was more likely to be estrogen receptor (ER) positive (p = 0.010) or progesterone receptor (PR) positive (p = 0.013) than in SH1, but less likely to be ER positive (p < 0.001) or PR positive (p = 0.012) than SH2. Among 15 tumors from TH patients, there was no clear pattern of loss of heterozygosity (LOH) for BRCA1 or BRCA2 in either BC or OC. Conclusions: Our observations suggest that clinical TH phenotypes resemble SH1. However, TH breast tumor marker characteristics are phenotypically intermediate to SH1 and SH2
Assessment of variation in immunosuppressive pathway genes reveals TGFBR2 to be associated with prognosis of estrogen receptor-negative breast cancer after chemotherapy
Introduction: Tumor lymphocyte infiltration is associated with clinical response to chemotherapy in estrogen receptor (ER) negative breast cancer. To identify variants in immunosuppressive pathway genes associated with prognosis after adjuvant chemotherapy for ER-negative patients, we studied stage I-III invasive breast cancer patients of European ancestry, including 9,334 ER-positive (3,151 treated with chemotherapy) and 2,334 ER-negative patients (1,499 treated with chemotherapy). Methods: We pooled data from sixteen studies from the Breast Cancer Association Consortium (BCAC), and employed two independent studies for replications. Overall 3,610 single nucleotide polymorphisms (SNPs) in 133 genes were genotyped as part of the Collaborative Oncological Gene-environment Study, in which phenotype and clinical data were collected and harmonized. Multivariable Cox proportional hazard regression was used to assess genetic associations with overall survival (OS) and breast
2q36.3 is associated with prognosis for oestrogen receptor-negative breast cancer patients treated with chemotherapy
Large population-based registry studies have shown that breast cancer prognosis is inherited. Here we analyse single-nucleotide polymorphisms (SNPs) of genes implicated in human immunology and inflammation as candidates for prognostic markers of breast cancer survival involving 1,804 oestrogen receptor (ER)-negative patients treated with chemotherapy (279 events) from 14 European studies in a prior large-scale genotyping experiment, which is part of the Collaborative Oncological Gene-environment Study (COGS) initiative. We carry out replication using Asian COGS samples (n=522, 53 events) and the Prospective Study of Outcomes in Sporadic versus Hereditary breast cancer (POSH) study (n=315, 108 events). Rs4458204-A near CCL20 (2q36.3) is found to be associated with breast cancer-specific death at a genome-wide significant level (n=2,641, 440 events, combined allelic hazard ratio (HR)=1.81 (1.49-2.19); P for trend=1.90 × 10 â ̂'9). Such survival-associated variants can represent ideal targets for tailored therapeutics, and may also enhance our current prognostic prediction capabilities
No evidence that protein truncating variants in BRIP1 are associated with breast cancer risk: implications for gene panel testing.
BACKGROUND: BRCA1 interacting protein C-terminal helicase 1 (BRIP1) is one of the Fanconi Anaemia Complementation (FANC) group family of DNA repair proteins. Biallelic mutations in BRIP1 are responsible for FANC group J, and previous studies have also suggested that rare protein truncating variants in BRIP1 are associated with an increased risk of breast cancer. These studies have led to inclusion of BRIP1 on targeted sequencing panels for breast cancer risk prediction. METHODS: We evaluated a truncating variant, p.Arg798Ter (rs137852986), and 10 missense variants of BRIP1, in 48 144 cases and 43 607 controls of European origin, drawn from 41 studies participating in the Breast Cancer Association Consortium (BCAC). Additionally, we sequenced the coding regions of BRIP1 in 13 213 cases and 5242 controls from the UK, 1313 cases and 1123 controls from three population-based studies as part of the Breast Cancer Family Registry, and 1853 familial cases and 2001 controls from Australia. RESULTS: The rare truncating allele of rs137852986 was observed in 23 cases and 18 controls in Europeans in BCAC (OR 1.09, 95% CI 0.58 to 2.03, p=0.79). Truncating variants were found in the sequencing studies in 34 cases (0.21%) and 19 controls (0.23%) (combined OR 0.90, 95% CI 0.48 to 1.70, p=0.75). CONCLUSIONS: These results suggest that truncating variants in BRIP1, and in particular p.Arg798Ter, are not associated with a substantial increase in breast cancer risk. Such observations have important implications for the reporting of results from breast cancer screening panels.The COGS project is funded through a European Commission's Seventh Framework Programme grant
(agreement number 223175 - HEALTH-F2-2009-223175). BCAC is funded by Cancer Research UK
[C1287/A10118, C1287/A12014] and by the European Community´s Seventh Framework Programme under
grant agreement number 223175 (grant number HEALTH-F2-2009-223175) (COGS). Funding for the iCOGS
infrastructure came from: the European Community's Seventh Framework Programme under grant agreement
n° 223175 (HEALTH-F2-2009-223175) (COGS), Cancer Research UK (C1287/A10118, C1287/A 10710,
C12292/A11174, C1281/A12014, C5047/A8384, C5047/A15007, C5047/A10692, C8197/A16565), the
National Institutes of Health (CA128978) and Post-Cancer GWAS initiative (1U19 CA148537, 1U19
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CA148065 and 1U19 CA148112 - the GAME-ON initiative), the Department of Defense (W81XWH-10-1-
0341), the Canadian Institutes of Health Research (CIHR) for the CIHR Team in Familial Risks of Breast
Cancer, Komen Foundation for the Cure, the Breast Cancer Research Foundation, and the Ovarian Cancer
Research Fund. This study made use of data generated by the Wellcome Trust Case Control consortium.
Funding for the project was provided by the Wellcome Trust under award 076113. The results published here
are in part based upon data generated by The Cancer Genome Atlas Project established by the National Cancer
Institute and National Human Genome Research Institute.This is the author accepted manuscript. The final version is available from BMJ Group at http://dx.doi.org/10.1136/jmedgenet-2015-103529
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